Materials and Reagents

Note: All of the items mentioned in section “Materials and Reagents” can be ordered from any qualified company.

Pipette tips
Tissue culture plates (58 x 15 mm) (Thermo Fisher Scientific)
Super Frost+ slides (Thermo Fisher Scientific)
TC flask T25 (SARSTEDT)
70 µm pore size mesh (BD Falcon)
40 µm pore size mesh (BD Falcon)
96-well flat bottom plates (NUNC)
96-well round bottom plates (NUNC)
Safety lock Eppendorf tubes
Stainless steel beads, 5 mm (QIAGEN)
Tissue processing/embedding cassettes (Sigma-Aldrich)
Scalpels (Swann Morton)
Flow-count beads (Beckman Coulter)
Vero cells
L929 cells
Mouse strain: C57BL/6 mice
Notes:
1. The genetic background of different mouse strains can influence studies and it has been observed that different mouse strains, C57BL/6, BALB/c, SJL/J, PL/J and A/J have different susceptibilities to HSV. C57BL/6 and BALB/c mice are moderately susceptible to HSV, whereas A/J, PL/J and SJL/J mice strains are highly susceptible (Lopez, 1975; Kastrukoff et al., 2012). It has also been observed that 129Sv background mice produce higher amounts of type I and type III IFN compared to C57BL/6 in response to genital HSV-2 infection, nevertheless no difference in viral titer is observed in the vagina after HSV-2 infection (Ank, 2008).
2. The vaginal HSV-2 infection model is based on pre-treatment with depo-provera. The pre-treatment with progesterone is an artificial intervention but is required for a reproducible enhanced susceptibility to HSV-2 infection in C57BL/6 mice.
Virus strain: HSV-2 333 strain (laboratory isolate, Stanberry et al., 1982)
Vesicular stomatitis virus (VSV/V10) (Indiana Strain) (ATCC, catalog number: VR-158 )
Phosphate buffered saline solution (PBS) (Sigma-Aldrich)
Depo-Provera (Pfizer)
Isoflourane (Piramal Critical Care)
DMEM (with no supplement of antibiotics or FSC) (Lonza)
Penicillin-streptomycin (Thermo Fisher Scientific)
Fetal calf serum (FCS) (In Vitro Technologies)
0.2% human immunoglobulin (ZLB Behring)
0.03% methylene blue (Sigma-Aldrich)
2% formaldehyde (Sigma-Aldrich)
Ethanol (Sigma-Aldrich)
Xylene (Sigma-Aldrich)
Methanol (Sigma-Aldrich)
0.5% hydrogen peroxide (H₂O₂) (Sigma-Aldrich)
10 mM Tris
0.5 mM EGTA (pH 9.0)
50 mM NH₄Cl
Polyclonal rabbit anti-HSV-2 (Agilent Technologies, Dako, catalog number: GA521 ) (1:100)
HRP-conjugated secondary antibody (Agilent Technologies, Dako, catalog number: P044801-2 ) (1:200)
3,3’-diaminobenzidine (Kem-En-Tec)
Mayer’s or Harris’s hematoxylin solution (Sigma-Aldrich)
Eukitt reagent (Eukitt, O. Kindler)
Collagenase/dispase (1 mg/ml) (Roche Diagnostics)
DNase 1 (2 mg/ml) (Roche Diagnostics)
Ethylenediaminetetraacetate acid disodium salt (EDTA) (0.02%)
Anti-mouse CD16/CD32 Ab (eBioscience)
IgG, 1 g/ml (Jackson ImmunoResearch)
Anti-mouse antibodies (BD Pharmingen):
1. CD45-APC (clone 30-F11)
2. NK1.1-FITC (clone PK136)
3. Nk1.1-PE (clone PK136)
4. CD11b-PE (clone M1/70)
5. Ly-6g-APC (clone 1A8)
6. APC RAT IgG2b, κ Isotype
7. FITC RAT IgG2a, κ Isotype
8. PE RAT IgG2a, κ Isotype
9. 7-AAD (Live/dead cell marker)
TRIzol (Invitrogen)
DEPC water
Chloroform (Sigma-Aldrich)
Isopropanol
Invitrogen Ambion DNA free kit
Bovine serum albumin (BSA) (Sigma-Aldrich)
0.05% saponin (Thermo Fisher Scientific)
0.2% gelatin (Thermo Fisher Scientific)
0.3% Triton X-100 (Thermo Fisher Scientific)
ELISA kits (R&D Systems)
RNase free water (Roche Diagnostics)
Oligo (dT) (Roche Diagnostics)
Expand reverse transcriptase (Roche Diagnostics)
Buffer A (see Recipes)
Buffer B (see Recipes)
Buffer C (see Recipes)
FACS buffer (see Recipes)

Equipment

Pipettes
8 arm multipipette
Microtome (Leica)
Microwave oven
Rocking platform
Humidity chamber
Mortar/pestle
Centrifuge
UV-light
Light microscopy
Homogenizer/shaker
Incubator
qPCR platform of choice
NanoDrop
Flow cytometer

Procedure

Vaginal infection
1. Mice are pretreated by subcutaneous injection of 200 µl (2 mg/mice, diluted in PBS) of Depo-Provera.
2. Five days later mice are anesthetized with isoflourane and carefully inoculated with a pipette intra vaginally with 20 μl HSV-2 (6.7 x 10⁴PFU) suspended in PBS, see Figure 1. It is important not to destroy or damage the vaginal epithelial layer during inoculation as this can interfere with the natural infection.
  
  Figure 1. Inoculation of virus intravaginally with a pipette
3. Subsequently, the mice are placed on their back and maintained under anesthesia for 10 min.
4. Vaginal washes/fluids can be collected at desired time points post infection by pipetting a volume of 40 µl PBS in and out of the vagina 12-15 times, repeated twice, and diluted to a final volume of 250 μl also in PBS. For harvest of vaginas, mice are euthanized by cervical dislocation (c.d.) and vaginas are removed surgically and used for RNA extraction, flow analysis or immunohistochemistry.
5. The genitally infected animals should be observed and examined daily and scored for vaginal inflammation, neurological illness, weight loss and death. The severity of disease is scored using the following criteria: 0, healthy; 1, genital erythema; 2, moderate genital inflammation; 3, purulent genital lesion/or generally bad conditions; 4, hind limb paralysis or general very poor conditions. Mice must be sacrificed by c.d. when reaching score 4 according to institutional guidelines.
Collection of vaginal washings for measuring viral titers and cytokine production
1. At desired days post infection, the vagina of the mice are washed by pipetting 2 x 40 μl of PBS in and out of the vagina, which is then further diluted in PBS to a final volume of 250 μl per mouse. Be careful not to damage vaginal epithelial layer.
2. Mice are anesthetized with isoflurane during the washing procedure. Viral titers and cytokine concentrations in the vaginal wash are usually highest at day 2 post infection.
3. After the washing, mice can be sacrificed for harvest of whole vaginal tissue for other analysis or continued for survival or disease score recordings.
Virus plaque assay
1. Place vaginal washes immediately on dry ice and store at -80 °C until analysis.
2. Virus titers of the vaginal washes are determined on monolayers of Vero cells. Cells are seeded in DMEM supplemented with 5% FCS at a density of 1.2 x 10⁶ cells/tissue culture plate (58 x 15 mm) and left overnight to settle.
3. The next day the media is discarded and 400 µl fresh DMEM with 5% FCS is added to each tissue culture plate. Subsequently add 100 μl of vaginal washes per culture plate diluted in 10-fold serial dilutions in DMEM with 2% FCS so the total volume is 500 µl in each culture plate. Each culture plate represents one dilution of a vaginal wash. Make duplicates of each dilution.
4. Incubate cells for 1 h and rock the plates every 15 min to ensure even distribution of the virus. After 1 h 5 ml of DMEM 5% FCS supplemented with 0.2% human immunoglobulin is added.
5. The tissue culture plates are then further incubated for 2-3 days and stained with 0.03% methylene blue in order to count the plaques.
Immunohistochemistry (IHC)
Note: Paraffin is preferred in contrast to frozen sections in order to preserve morphology. We do not use perfusion fixation because the blood circulation in the vagina seems to be low. The vaginas are instead surgically removed and fixed by immersion in 2% formaldehyde in PBS for 24 h. Work at room temperature if nothing else is stated.
1. Vaginas are dissected and placed in 2-4% formaldehyde in PBS and fixed for 24 h.
2. The fixed tissue is placed in tissue processing/embedding cassettes.
3. Dehydration of fixed tissue: 70% ethanol for 2 h, 96% ethanol for 2 h and 99% for 2 h.
4. The dehydrated tissue is then placed in xylene for 2 h.
5. The tissue is embedded in warm (60 °C) paraffin for 2 h.
6. Cut two-micrometer sections from tissue blocks on a microtome and mount the sections on Super Frost+ slides.
7. The slides are the dewaxed in xylene 2 x for 4-5 min.
8. Sections are rehydrated in a series of ethanol: 3 x 99% ethanol (30 min in total), 2 x 96% ethanol (20 min in total) and finally 10 min in 70% ethanol. Then the sections are rinsed in MilliQ water 3-4 times.
9. Endogenous peroxidase enzymes are blocked using absolute methanol with 0.5% hydrogen peroxide (H₂O₂) for 10-15 min.
10. Sections are boiled in microwave oven in 10 mM Tris, 0.5 mM EGTA (pH 9.0) to reveal antigens. The boiling time depends on the microwave oven ~6 min. full power and then 10 min on half power. This will provide a soft interval-boiling.
11. Cool down on ice using a rocking platform.
12. The free aldehyde groups are blocked by 50 mM NH₄Cl in PBS for 30 min.
13. Sections are then washed 3 times (3 x 10 min) in buffer A (see Recipes) and incubated with primary antibody against HSV-2 diluted in buffer B (see Recipes) overnight at 4 °C in a humidity chamber.
14. The next day take the sections out of the fridge and allow to reach room temp.
15. Wash with buffer C (see Recipes) (3 x 10 min.) and incubate the sections with HRP-conjugated secondary antibody (P448, 1:200) in buffer B for 1 h.
16. Rinse in buffer C 3 x (total 30 min).
17. Antibody binding is visualized by use of 3,3’-diaminobenzidine (DAB) (Kem-En-Tec) in 0.03% H₂O₂. DAB is freshly made by dissolving 1 tablet in 10 ml MilliQ water and just before use, add 10 µl 35% H₂O₂.
18. Rinse in PBS 3 x
19. The sections are counterstained with Mayer’s or Harris’s hematoxylin solution for 2 min and rinsed for 20 min under running tap water.
20. The sections are mounted using Eukitt reagent.
Flow cytometry
1. Single cell suspension of mouse vagina can be obtained by enzymatic and mechanic processing. The dissected vaginas are cut in to small pieces with a scalpel and transferred to a small culture flask (T25). Add 4 ml collagenase/dispase (stock: 1 mg/ml) and 2 ml DNase I (stock: 2 mg/ml) in total 6 ml and incubate under constant stirring at 37 °C for 45 min.
2. The tissue suspension is then gently mashed using a mortar pestle and filtered through a 70 µm pore size mesh and then passed through a 40 µm pore size mesh (if cells of interest are smaller than 40 µm) and washed with PBS with 0.02% EDTA to stop enzyme activity.
3. Cells are then centrifuged for 8 min at 300 x g and re-suspended in 200 μl PBS/vagina. The following staining can be done in a round bottom 96-well plate.
4. Prior to staining the cells are blocked for 10 min on ice with anti-mouse CD16/CD32 Ab (1:100) and mouse and rat IgG (1 µg/ml).
5. Wash with cold PBS and centrifuge the plate at 300 x g for 4 min at 4 °C.
6. Stain for LiveDead (7-AAD) (1:1,000 in PBS). Incubate for 15 min on ice.
7. Wash twice with PBS.
8. The cells are incubated with primary antibodies in 100 µl for 30 min on ice in the dark and washed in FACS buffer (see Recipies).
9. The following primary anti-mouse antibodies can be used for flow identification of cell populations: CD45-APC (clone 30-F11), NK1.1-FITC (clone PK136), Nk1.1-PE (clone PK136), CD11b-PE (clone M1/70), Ly-6g-APC (clone 1A8), APC RAT IgG2b, κ Isotype, FITC RAT IgG2a, κ Isotype and PE RAT IgG2a, κ Isotype and 7-AAD (Live/dead cell marker). Flow-count beads can be added to the flow samples just before analysis for determining cell counts.
10. The cells are resuspended and fixed in 250 μl 1% formaldehyde in PBS.
Detection of cytokines in vaginal washes
Note: In order to determine the amount of cytokines in the vaginal washes, we utilized ELISA and Luminex technology and for detection of IFN-α/β we used an L929 cell-based bioassay. Cytokines CXCL10, CXCL9, CCL5 (Rantes), IL-6, IFN-λ and IFN-γ can be easily detected by ELISA kits from any supplier. IFN-α/β bioactivity can be measured by use of an L929 cell-based bioassay in a 96-well plate.
1. Prior to use HSV-2 in the vaginal samples must be inactivated on ice by UV-light treatment for 6 min.
2. Add 50 µl DMEM 5% FCS to each well in a flat bottom 96-well plate. Each plate can hold 8 different samples/controls (A2-H2) as the samples are diluted across the plate. Column 1 (A1-H1) serves as a cell control and column 12 (A12-H12) as a virus control.
3. Add 50 µl of vaginal washes or murine IFN-α/β to each well in row 2 (A2-H2). Make successive two-fold dilutions with an 8 arm multipippette down to row 11 (A11-H11).
4. L929 cells (2 x 10⁴ cells/well in 100 µl) in DMEM supplemented with 5% FCS are added to each well and the plates incubated overnight at 37 °C. L929 cells are grown in DMEM supplemented with 200 IU/ml penicillin, 200 µg/ml streptomycin and 5% FCS.
5. The next day 50 µl of Vesicular Stomatitis Virus (VSV/V10) (1.6 x 10⁴ PFU/ml) is added to each well EXCEPT row 1 (A1-H1) (serve as a cell control) and the plates are further incubated for 2-3 days.
6. If there is IFN-α/β in the samples being tested the IFN-α/β will protect the cells against the cytotoxic effect of VSV as observed in the bright field microscope. The dilution mediating 50% protection from virus induced cell death is defined as 1 U of IFN-α/β/ml. The bioassay has a lower detection limit of 6 U/ml.
RNA extraction from tissue and quantitative Real-Time PCR
Total RNA from isolated vaginas is extracted with TRIzol, according to the recommendations of the manufacturer.
1. Set the centrifuge with rotor for Eppendorf tubes at 2-3 °C.
2. Add 100-150 µl DEPC water and a 5 mm steel beads to each sample/vagina and homogenize the tissue using the homogenizer/shaker. Use safety lock Eppendorf tubes. Repeat if needed.
3. After homogenization immediately place the samples on ice.
4. Add 500 µl TRIzol to each sample and vortex. (According to Invitrogen use 1 ml TRIzol to 50-100 mg of tissue). Incubate at RT for 5 min.
5. Add 1:5 chloroform (100 µl in case of 500 µl TRIzol) and vortex until the mixture is ‘candyfloss’ colored. Incubate for 5 min at RT or until two phases can be detected.
6. Centrifuge for 15 min at 10,000 x g at 4 °C.
7. Pipet the upper clear phase to new Eppendorf tubes. Avoid the white protein film on the side of the tubes.
8. Add isopropanol (1:1). Vortex
9. Place the tubes at -20 °C for 2 h or at RT for 10 min.
10. Centrifuge for 12 min at 10,000 x g at 4 °C.
11. Discard the supernatant. The RNA precipitate forms a white gel-like pellet at the bottom of the tube.
12. Add 0.5 ml ice-cold ethanol (80 %) and vortex briefly. Centrifuge for 4 min at 10,000 x g. Repeat wash step.
13. Discard the supernatant. Next, air-dry the pellet. If needed use a heating block at 80 °C.
  Note: It can be difficult to dissolve the RNA pellet.
14. Pellet is re-suspended in 20-50 µl DEPC-water. Vortex.
15. DNase-free treatment: (Invitrogen Ambion DNA free kit)

Recipes

DMEM supplemented with 200 IU/ml penicillin, 200 µg/ml streptomycin and FCS
DMEM supplemented with 2% FCS and 0.2% human immunoglobulin
Buffer A
PBS with 1% BSA, 0.05% Saponin, 0.2% gelatin
Buffer B
PBS with 0.1% BSA and 0.3% Triton X-100
Buffer C
PBS with 0.1% BSA, 0.2% gelatin and 0.05% Saponin
FACS buffer
2 % BSA in PBS (0.09% Azide if necessary)

Acknowledgments

We thank K.S. Petersen and I.M. Poulsen for technical assistance and the AU FACS Core facility for technical help. Supported by The Danish Medical Research Council (12-124330 to S.R.P.; 1331-xg00133B to H.H.W.), the Novo Nordisk Foundation (S.R.P.), the Lundbeck Foundation (R34-3855 to S.R.P.), Aarhus University Research Foundation (S.R.P), Faculty of Health Sciences, AU (M.B.I.), the Danish National Research Foundation (DNRF107 to H.H.W.), the Excellence Program for Interdisciplinary Research (CDO2016 to H.H.W.).

References

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